PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100174670031
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family G2-like
Protein Properties Length: 346aa    MW: 38058.3 Da    PI: 9.208
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100174670031genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like96.22.4e-30195250156
                       G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                                   k+r++W++eLH++F++a++ LGGs+ AtPk+i+elmkv+gLt+++vkSHLQkYRl+
  Ote100174670031|100174670031 195 KARRCWSTELHRKFLQALQLLGGSHLATPKQIRELMKVDGLTNDEVKSHLQKYRLH 250
                                   68****************************************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129413.37192252IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.2E-26193253IPR009057Homeodomain-like
SuperFamilySSF466891.65E-17193253IPR009057Homeodomain-like
TIGRFAMsTIGR015572.0E-26195250IPR006447Myb domain, plants
PfamPF002493.0E-7197248IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 346 aa     Download sequence    Send to blast
MTHNHKMQQR CQDYIHALED ERRKIQVFKR ELPLCLELVT QAIEACKQQL SGTSTTTEYN  60
LNGQSECSEQ TSSEAPILEE FMPLKSSQEQ ESDKSTDIQK DSKTCKKSDW LRSVQLWNQT  120
PDPSSSQDSR KTVAVVEVKR DGSSGAFHPF NKEKSQAETR VSPVNRSVPP ASTSSSVDTG  180
GGNKKAEKEK EAQRKARRCW STELHRKFLQ ALQLLGGSHL ATPKQIRELM KVDGLTNDEV  240
KSHLQKYRLH TRRPSPSIQN NNNNTQTPQF VVVGGIWVPP EYAAMATTAT SGSGEASGAA  300
TSNGIYAPVA TLPPAKQRRS DSEGGVRSHS PATSSSTHTT TASAAH
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00160DAPTransfer from AT1G25550Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011070832.11e-157PREDICTED: uncharacterized protein LOC105156412
TrEMBLD7T9871e-139D7T987_VITVI; Putative uncharacterized protein
STRINGVIT_01s0011g03110.t011e-138(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA52192438